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PP_004MK3W.1
Download
Download FASTA
Download metadata TSV
Spain/PP_004MK3W.1/2025-12-30
Cristina Andres,
Alejandra Gonzalez Sanchez,
Ignasi Prats,
Karen Garcia Comunas,
Raquel Vaz,
Maria Carmen Martin,
Nieves Larrosa &
Andres Anton
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca
Sample details
Collection date
2025-12-30
Sampling location
Spain (Catalonia)
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-02 15:20
agonzalez
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.3.11
INSDC
INSDC accession
OZ416294.1
BioProject accession
PRJEB91357
BioSample accession
SAMEA121925899
GCA accession
GCA_982197335.1
Host
Host
Human (Homo sapiens)
Host age
3
Host gender
Male
Submission details
Submission ID
hRSV/A/Spain/CT-HUAV-344807/2025
Submitting group
Respiratory Virus Unit, Hospital Universitari Vall d'Hebron, Barcelona, Spain
Date submitted
2026-03-02 15:20:28 UTC
Date released
2026-03-04 07:04:23 UTC
Earliest release date
2026-03-04
Alignment and QC
Length
15195 (99.8%)
# of SNPs
242
# of inserted bases
3
# of deleted bases
1
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
59
C
T
66
A
A
67
G
C
75
A
C
90
T
C
183
T
G
192
A
A
565
G
G
587
T
C
589
T
C
983
A
C
1012
T
G
1034
A
G
1050
A
G
1075
A
G
1077
A
T
1359
C
A
1361
G
Show more
Deletions
4592
Insertions
ins_3154:A, ins_15110:NT
Amino acid mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
F
F:
T
12
I
F:
A
23
T
F:
K
123
R
G
G:
K
3
N
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
G
224
E
G:
S
243
I
G:
T
245
A
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
Y
273
H
G:
P
274
S
G:
D
284
G
Show more
L
L:
N
37
D
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
M
824
V
L:
L
835
M
L:
L
1438
Q
L:
N
1536
D
L:
S
1593
G
L:
I
1716
M
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
S
1754
L
L:
M
1757
I
L:
T
1942
I
L:
K
2064
R
L:
T
2069
A
M2-1
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
D
62
G
M2-2:
T
77
A
N
N:
K
84
R
N:
V
352
A
P
P:
L
55
P
P:
T
92
M
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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