PP_004M457.1

Display Name: Japan/PP_004M457.1/2026-01-16
S. Watanabe, T. Motoya, M. Matsuzaki, S. Osawa, S. Tsuboyama, A. Okubo & K. Komuro

Sample details

Collection date
2026-01-16
Country
Japan
Isolate name
MVs/Ibaraki.JPN/3.26[B3]

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 06:52insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
B3

Authors

Author affiliations
Laboratory of virology; 993-2 Kasaharacho, Mito, Ibaraki 310-0852

INSDC

INSDC accession
NCBI release date
2026-02-26
NCBI update date
2026-02-26

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
450
Completeness
2.83%
# of SNPs
42
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
LC919994.1
Submitting group
Date submitted
2026-02-27 06:52:09 UTC
Date released
2026-02-27 07:01:47 UTC
Earliest release date
2026-02-26

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • C1253T
  • C1271T
  • C1325T
  • T1328C
  • G1334A
  • C1337T
  • A1349G
  • A1387G
  • A1394G
  • A1397G
  • G1398A
  • C1409T
  • A1415G
  • T1418C
  • G1423A
  • G1434A
  • G1435A
  • T1436C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001498.1 reference

    Substitutions

    N

  • N:N427S
  • N:G431R
  • N:R439K
  • N:G443N
  • N:Y451H
  • N:G455E
  • N:S456P
  • N:A462V
  • N:S470G
  • N:M471T
  • N:S481F
  • N:G482S
  • N:L505S
  • N:G509D
    • Deletions
    None
    Insertions
    None

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