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PP_004L02K.1
Download
Download FASTA
Download metadata TSV
Ireland/PP_004L02K.1/2025-12-31
Michael Carr,
Cliona Kenna,
Ursula Morley,
Andrea Crowley,
Charlene Bennett,
Weronika Banka,
Laura Fahey,
Alan Rice,
Jonathan Dean,
Daniel Hare &
Cillian F. De Gascun
National Virus Reference Laboratory, University College Dublin, Dublin, Ireland
Sample details
Collection date
2025-12-31
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20373942
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-02-25 16:08
alanrice
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.3
INSDC
INSDC accession
OZ414577.1
BioProject accession
PRJEB90083
BioSample accession
SAMEA121800098
GCA accession
GCA_981584915.1
Host
Host
Homo sapiens
Sequencing
Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]
Submission details
Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00000343/2026
Submitting group
NVRL Ireland
Date submitted
2026-02-25 16:08:14 UTC
Date released
2026-02-25 16:08:56 UTC
Earliest release date
2026-02-25
Alignment and QC
Length
15222 (100%)
# of SNPs
233
# of inserted bases
2
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
59
C
T
66
A
A
67
G
C
90
T
C
183
T
G
232
A
T
372
C
T
375
C
G
587
T
C
604
T
C
790
T
A
820
T
C
1012
T
G
1034
A
G
1050
A
G
1077
A
A
1197
T
T
1359
C
Show more
Deletions
N/A
Insertions
ins_3154:A, ins_15115:T
Amino acid mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
F
F:
T
12
I
F:
V
18
A
G
G:
A
57
V
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
T
210
A
G:
G
224
E
G:
S
243
I
G:
H
258
Q
G:
Q
261
R
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
S
283
F
G:
D
284
G
G:
P
298
L
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
M
M:
I
159
T
M2-1
M2-1:
V
77
I
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
T
77
A
N
N:
V
352
A
NS1
NS1:
V
55
I
P
P:
L
55
P
P:
T
92
M
P:
S
215
H
SH
SH:
V
49
A
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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