PP_004KZS7.1

Ireland/PP_004KZS7.1/2026-01-04
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-04
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20373932

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-25 16:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.1.4

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00005215/2026
Submitting group
Date submitted
2026-02-25 16:08:14 UTC
Date released
2026-02-25 16:08:56 UTC
Earliest release date
2026-02-25

Alignment and QC

Length
15222 (100%)
# of SNPs
255
# of deleted bases
3

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • C183T
  • G198A
  • G240A
  • A493G
  • A529G
  • G551A
  • C622T
  • G664A
  • T697C
  • C769T
  • C782T
  • T832C
  • C853T
  • T892C
  • G1000A
Deletions

4175, 4592, 15115
Insertions
N/A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:L3S
  • F:R113K

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:N103T
  • G:A122V
  • G:I133V
  • G:I134K
  • G:L142S
  • G:S144I
  • G:T203I
  • G:K221R
  • G:G224V
  • G:V225A
  • G:L226F
  • G:S243I
  • G:K262E
  • G:I265L
  • G:S270P

L

  • L:N143D
  • L:D146G
  • L:P171L
  • L:T179S
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:I1653V
  • L:I1656T
  • L:K1661N
  • L:N1719S
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:G1735D
  • L:L1932I
  • L:V1934I

M

  • M:M43I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:V352A

P

  • P:L55P
  • P:I62T
Deletions
N/A
Insertions
N/A

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