PP_004KZNF.1

Ireland/PP_004KZNF.1/2026-01-24
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-24
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20373928

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-25 16:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.5.2

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00009521/2026
Submitting group
Date submitted
2026-02-25 16:08:14 UTC
Date released
2026-02-25 16:08:56 UTC
Earliest release date
2026-02-25

Alignment and QC

Length
14821 (96.3%)
# of SNPs
230
# of deleted bases
4
# of unknown bases
169

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C90T
  • C115T
  • A135T
  • C183T
  • T246C
  • T697C
  • T1004C
  • A1009G
  • A1021G
  • T1028C
  • G1050A
  • A1051C
  • A1078G
  • G1131A
  • G1248A
  • T1254C
  • T1281C
  • T1359C
Deletions

4592, 7516-7518
Insertions
N/A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:A103T
  • F:T122A

G

  • G:A57V
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:I134K
  • G:Q140R
  • G:P206Q
  • G:K209R
  • G:G224E
  • G:S243I
  • G:L248I
  • G:K262E
  • G:I265L
  • G:P274L
  • G:S283P
  • G:D284G
  • G:Y297H
  • G:V303A

L

  • L:Y125F
  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:N1719D
  • L:N1723G
  • L:E1725G
  • L:G1731D
  • L:T1942I
  • L:V1943D

M

  • M:M73L
  • M:N175S

M2-1

  • M2-1:S176P

M2-2

  • M2-2:S44N

N

  • N:I104V
  • N:V352A

P

  • P:L55P
  • P:T69I
  • P:E239D
Deletions
N/A
Insertions
N/A

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