PP_004KZGU.1

Ireland/PP_004KZGU.1/2026-01-13
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-13
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20373922

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-25 16:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.3

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00004457/2026
Submitting group
Date submitted
2026-02-25 16:08:14 UTC
Date released
2026-02-25 16:08:56 UTC
Earliest release date
2026-02-25

Alignment and QC

Length
14206 (87.8%)
# of SNPs
188
# of inserted bases
1
# of deleted bases
2
# of unknown bases
844
# of frame shifts
1
Frame shifts
F:449-575(nt:7040-7421)

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C691T
  • T1137C
  • T1218C
  • T1326C
  • T1359C
  • G1368A
  • T1413A
  • T1422C
  • A1599C
  • T1785C
  • C1788T
  • C1806T
  • T1924C
  • T2049C
  • T2073C
  • T2083C
  • T2165C
  • C2181A
Deletions

7039, 7428
Insertions

ins_3154:A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:G446R

G

  • G:P71L
  • G:H90Y
  • G:L97F
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:V1219I
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:I1734M

M2-1

  • M2-1:P120L
  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:H45Y
  • M2-2:T77A

N

  • N:V352A

P

  • P:L55P
  • P:T92M
Deletions
N/A
Insertions
N/A

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