PP_004KZEY.1

Ireland/PP_004KZEY.1/2026-01-08
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

Sample details

Collection date
2026-01-08
Sampling location
Ireland
GISAID Isolate ID
EPI_ISL_20373920

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-25 16:08alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3.12

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00004114/2026
Submitting group
Date submitted
2026-02-25 16:08:14 UTC
Date released
2026-02-25 16:08:56 UTC
Earliest release date
2026-02-25

Alignment and QC

Length
15163 (96%)
# of SNPs
217
# of inserted bases
1
# of unknown bases
552

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • C183T
  • T353C
  • A357G
  • A563G
  • G587T
  • C686T
  • G1077A
  • T1209C
  • A1275G
  • T1287C
  • T1308C
  • A1341G
  • T1359C
  • G1368A
  • T1413A
Deletions
N/A
Insertions

ins_3154:A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:P126S
  • G:V131D
  • G:I134K
  • G:N178G
  • G:K221R
  • G:G224E
  • G:P230T
  • G:N242D
  • G:S243I
  • G:S250T
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L

L

  • L:P171L
  • L:A173S
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:E1190D
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:V2129I

M

  • M:K172R

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:L95S

P

  • P:L55P
  • P:T72N
  • P:T92M

SH

  • SH:V49I
Deletions
N/A
Insertions
N/A

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