PP_004J71J.1

Display Name: Ireland/PP_004J71J.1/2025-11-28
Michael Carr, Cliona Kenna, Ursula Morley, Andrea Crowley, Charlene Bennett, Weronika Banka, Laura Fahey, Alan Rice, Jonathan Dean, Daniel Hare & Cillian F. De Gascun

Sample details

Collection date
2025-11-28
Country
Ireland
GISAID Isolate ID
EPI_ISL_20346269

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-03 16:50alanriceOPEN
Data use terms URL

Lineage

Lineage
A.D.3

Authors

Author affiliations
National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

INSDC

INSDC accession
BioProject accession
BioSample accession
GCA accession

Host

Host name - scientific
Homo sapiens

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Alignment and QC metrics

Length
13750
Completeness
85.83%
# of SNPs
191
# of inserted bases
2
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
680
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/A/Ireland/un-NVRL-GIRL00088455/2025
Submitting group
Date submitted
2026-02-03 16:50:24 UTC
Date released
2026-02-03 16:52:09 UTC
Earliest release date
2026-02-03

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T1359C
  • T1413A
  • T1422C
  • A1458G
  • A1533G
  • A1638G
  • T1644C
  • C1788T
  • C1806T
  • T2050C
  • T2165C
  • G2298A
  • C2395T
  • T2481C
  • A2524G
  • C2548A
  • C2592T
  • G2593A
    • Deletions
    None
    Insertions
    ins_3154:A, ins_7586:A

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:T12I
  • F:A39T
  • F:M115T
  • F:S276N

    • G

  • G:I76T
  • G:H90Y
  • G:L97P
  • G:L101F
  • G:T113I
  • G:P120L
  • G:P126L
  • G:V131D
  • G:I134K
  • G:N178G
  • G:T210I
  • G:G224E
  • G:V225A
  • G:P230T
  • G:K240T
  • G:S243I
  • G:N251Y
  • G:H258Q

    • L

  • L:T104N
  • L:P171L
  • L:A173S
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D

    • M2-1

  • M2-1:R20K
  • M2-1:P120L
  • M2-1:S176P

    • M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

    • N

  • N:V352A

    • P

  • P:L55P
  • P:T92I
    • Deletions
    None
    Insertions
    None

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