PP_004FE3E.1

Display Name: USA/PP_004FE3E.1/2025-11-27
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels & S. Namugenyi

Sample details

Collection date
2025-11-27
Country
USA
Admin level 1
Minnesota
Isolate name
MN-MDH-RSVB-03326

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-25 00:59insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

Authors

Author affiliations
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2025-12-23
NCBI update date
2025-12-23
Raw reads accession

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
15141
Completeness
93.35%
# of SNPs
136
# of inserted bases
5
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
928
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
PX698336.1
Submitting group
Date submitted
2025-12-25 00:59:15 UTC
Date released
2025-12-25 01:07:14 UTC
Earliest release date
2025-12-23

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T48C
  • T144C
  • C212T
  • T357C
  • A386G
  • G434A
  • G513T
  • G579A
  • C998A
  • C1037T
  • T1273C
  • G1385A
  • C1694T
  • G1732A
  • T1846C
  • A2059T
  • C2074T
  • C2198T
    • Deletions
    973, 4586
    Insertions
    ins_3204:A, ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:V94I
  • G:E97D
  • G:S100G
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H
  • G:S307L

    • L

  • L:S173L
  • L:K570R
  • L:V715I
  • L:R1759K
  • L:S1931N
  • L:T1987I
  • L:A2014S

    • M2-2

  • M2-2:I2T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I

    • NS1

  • NS1:Y30H
  • NS1:M126I

    • SH

  • SH:I49P
    • Deletions
    None
    Insertions
    None

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