PP_004EP29.1

Display Name: Australia/PP_004EP29.1/2025-09-06
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

Sample details

Collection date
2025-09-06
Country
Australia
Admin level 1
Northern Territory
City
Darwin
GISAID Isolate ID
EPI_ISL_20254356

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-17 01:47clydeOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
WHO Collaborating Centre for Reference and Research on Influenza

Host

Host name - common
Human
Host gender
Male

Alignment and QC metrics

Length
15218
Completeness
99.86%
# of SNPs
139
# of inserted bases
20
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Australia/NT-RDH-0332/2025
Submitting group
Date submitted
2025-12-17 01:47:10 UTC
Date released
2025-12-17 01:49:09 UTC
Earliest release date
2025-12-17

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • A131G
  • C212T
  • G513T
  • G547A
  • G579A
  • A590G
  • C666T
  • C883T
  • T996A
  • T1042C
  • A1057G
  • G1385A
  • A1462G
  • G1546A
  • T1555C
  • G1732A
    • Deletions
    973, 4586
    Insertions
    ins_0:TGCACACTCGAAAAAA, ins_15092:ACAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:S211N

    • G

  • G:N4T
  • G:A74V
  • G:R98K
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P150S
  • G:P214S
  • G:P221L
  • G:P229L
  • G:T234A
  • G:H257Y
  • G:L270P

    • L

  • L:N37D
  • L:G146D
  • L:I185V
  • L:K260R
  • L:K396R
  • L:I445V
  • L:K570R
  • L:K1704N
  • L:R1759K
  • L:I1834V
  • L:L1841I
  • L:T1987I

    • M

  • M:T89I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:C49F

    • N

  • N:V97I

    • NS2

  • NS2:T3A
  • NS2:T28I

    • P

  • P:D229G
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue