PP_004EMHE.1

Display Name: Australia/PP_004EMHE.1/2025-07-29
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

Sample details

Collection date
2025-07-29
Country
Australia
Admin level 1
Victoria
City
Melbourne
GISAID Isolate ID
EPI_ISL_20254479

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-17 01:39clydeOPEN
Data use terms URL

Lineage

Lineage
A.D.1.6

Authors

Author affiliations
WHO Collaborating Centre for Reference and Research on Influenza

Host

Host name - common
Human
Host gender
Female

Alignment and QC metrics

Length
15218
Completeness
99.93%
# of SNPs
243
# of inserted bases
6
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/A/Australia/VIC-MMC-0293/2025
Submitting group
Date submitted
2025-12-17 01:39:47 UTC
Date released
2025-12-17 01:41:23 UTC
Earliest release date
2025-12-17

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T61G
  • T66A
  • C90T
  • C183T
  • G198A
  • A303T
  • C360T
  • A399G
  • T497C
  • G551A
  • G555A
  • G664A
  • T697C
  • G747A
  • G1000A
  • C1012T
  • T1035A
  • C1046T
    • Deletions
    4175, 4592
    Insertions
    ins_0:TTGC, ins_15095:AA

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:G106E
  • G:S121I
  • G:I134K
  • G:L142S
  • G:P143S
  • G:P217S
  • G:G224E
  • G:N242T
  • G:S243I
  • G:K262E
  • G:I265L
  • G:D284G
  • G:G296S
  • G:S299N
  • G:Y304H
  • G:T319A
  • G:T320A

    • L

  • L:N143D
  • L:P171L
  • L:T179S
  • L:R256K
  • L:Y598H
  • L:I1137V
  • L:K1171R
  • L:R1186K
  • L:M1225I
  • L:L1438Q
  • L:I1653V
  • L:K1661N
  • L:H1690Y
  • L:H1707Q
  • L:N1719Y
  • L:N1723S
  • L:N1724D
  • L:E1725G

    • M

  • M:M43I

    • M2-1

  • M2-1:S176P

    • M2-2

  • M2-2:Y24C
  • M2-2:S44N

    • N

  • N:V352A

    • NS2

  • NS2:R50K

    • P

  • P:L55P

    • SH

  • SH:I38S
    • Deletions
    None
    Insertions
    None

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