PP_004DMXN.1

Display Name: Zambia/PP_004DMXN.1/2018-09-03
M. Kajihara, B. M. Hang'ombe, K. Changula, H. Harima, M. Isono, K. Okuya, R. Yoshida, A. Mori-Kajihara, Y. Eto, Y. Orba, H. Ogawa, Y. Qiu, H. Sawa, E. Simulundu, D. Mwizabi, M. Munyeme, D. Squarre, V. Mukonka, A. Mweene & A. Takada

Sample details

Collection date
2018-09-03
Country
Zambia

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-28 11:23insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.B

Authors

Author affiliations
Research Center for Zoonosis Control; Kita 20, Nishi 10, Kita-ku, Sapporo, Hokkaido 0010020

INSDC

INSDC accession
NCBI release date
2019-08-23
NCBI update date
2023-06-17

Host

Host taxon ID
Host name - scientific
Rousettus aegyptiacus

Alignment and QC metrics

Length
302
Completeness
1.58%
# of SNPs
19
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
LC465156.1
Submitting group
Date submitted
2025-11-28 11:23:32 UTC
Date released
2025-11-28 11:29:30 UTC
Earliest release date
2019-08-23

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • T3598C
  • C3616T
  • C3634A
  • C3635T
  • T3649C
  • A3655G
  • G3667A
  • A3673G
  • A3685G
  • C3688T
  • T3740C
  • C3754T
  • A3760G
  • C3766T
  • T3775C
  • T3826C
  • A3829G
  • T3841C
  • C3853T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001608.3 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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