PP_0046YES.1

Display Name: Australia/PP_0046YES.1/2025-04-29
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

Sample details

Collection date
2025-04-29
Country
Australia
Admin level 1
Northern Territory
City
Darwin

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-24 06:54clydeOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
WHO Collaborating Centre for Reference and Research on Influenza

INSDC

BioProject accession
BioSample accession

Host

Host name - common
Human
Host gender
Male

Alignment and QC metrics

Length
15217
Completeness
99.86%
# of SNPs
162
# of inserted bases
20
# of deleted bases
3
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/B/Australia/NT-RDH0165/2025
Submitting group
Date submitted
2025-09-24 06:53:54 UTC
Date released
2025-09-24 07:08:26 UTC
Earliest release date
2025-09-24

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • C38T
  • C212T
  • T449C
  • G513T
  • C564T
  • G579A
  • T592C
  • T707C
  • G955A
  • T1011C
  • G1025A
  • A1027T
  • G1385A
  • A1537G
  • C1714A
  • G1732A
    • Deletions
    973, 3201, 4586
    Insertions
    ins_0:TGCACACTCGAAAAAA, ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:N165S
  • F:S190N
  • F:R209Q
  • F:S211N

    • G

  • G:A74V
  • G:K85E
  • G:I87T
  • G:Y90H
  • G:S100G
  • G:T130A
  • G:T131A
  • G:I137T
  • G:T139I
  • G:P214S
  • G:P221L
  • G:P229S
  • G:R240G
  • G:S243I
  • G:T253A
  • G:K276R
  • G:A301T

    • L

  • L:I392V
  • L:K570R
  • L:S610P
  • L:H1750N
  • L:R1759K
  • L:A1807T
  • L:T1987I

    • M2-1

  • M2-1:T180I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:C49F

    • N

  • N:V97I

    • P

  • P:T72A
    • Deletions
    None
    Insertions
    None

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