PP_00463EM.1

Display Name: Australia/PP_00463EM.1/2025-04-28
Xiaomin Dong, Steven Edwards, Yi Mo Deng, Ian Barr, Arada Hirankitti & Clyde Dapat

Sample details

Collection date
2025-04-28
Country
Australia
Admin level 1
Northern Territory
City
Darwin

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-24 06:50clydeOPEN
Data use terms URL

Lineage

Lineage
A.D.1.6

Authors

Author affiliations
WHO Collaborating Centre for Reference and Research on Influenza

INSDC

BioProject accession
BioSample accession

Host

Host name - common
Human
Host gender
Male

Alignment and QC metrics

Length
15216
Completeness
99.93%
# of SNPs
235
# of inserted bases
4
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
hRSV/A/Australia/NT-RDH0172/2025
Submitting group
Date submitted
2025-09-24 06:50:43 UTC
Date released
2025-09-24 07:09:22 UTC
Earliest release date
2025-09-24

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • C90T
  • C183T
  • G198A
  • A303T
  • C360T
  • A399G
  • T497C
  • G551A
  • G555A
  • G602A
  • G664A
  • T697C
  • G747A
  • G1000A
  • C1012T
  • T1035A
  • C1046T
    • Deletions
    4175, 4592
    Insertions
    ins_0:TTGC

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:V76I

    • G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:G106E
  • G:T119A
  • G:P120L
  • G:S121I
  • G:I134K
  • G:L142S
  • G:P143S
  • G:P217S
  • G:G224E
  • G:N242T
  • G:S243I
  • G:K262E
  • G:I265L
  • G:T281A
  • G:D284G

    • L

  • L:N143D
  • L:P171L
  • L:T179S
  • L:R256K
  • L:Y598H
  • L:M1225I
  • L:L1438Q
  • L:S1597N
  • L:I1653V
  • L:K1661N
  • L:H1690Y
  • L:H1707Q
  • L:N1719Y
  • L:N1723S
  • L:N1724D
  • L:E1725G
  • L:G1731D
  • L:H1804Y
  • L:Y2163N

    • M

  • M:M43I
  • M:V153A

    • M2-1

  • M2-1:S176P

    • M2-2

  • M2-2:Y26C
  • M2-2:S46N

    • N

  • N:V352A

    • NS2

  • NS2:D2N
  • NS2:R50K

    • P

  • P:L55P

    • SH

  • SH:I38S
    • Deletions
    None
    Insertions
    None

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