PP_003V5QL.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Democratic_Republic_of_the_Congo/PP_003V5QL.1/2022-05-04
Jean-Claude Makangara-Cigolo, Chloe Muswamba-Kayembe, Adrienne Amuri-Aziza, Gradi Luakanda - Ndelemo, Prince Akil-Bandali, Francisca Muyembe-Mawete, Francois Edidi - Atani, Princesse Paku-Tshambu, Andre Citenga, Emmanuel Lokilo-Lofiko, Ola Rilia, Servet Kimbonza, Elisabeth Pukuta, Daniel Mukadi-Bamuleka, Gabriel Kabamba -Lungenyi, Raphael Lumembe-Numbi, Catherine Pratt, Tony Wawina-Bokalanga, Eddy Kinganda-Lusamaki, Dieudonne Mumba - Ngoyi, Jean-Jacques Muyembe-Tamfum, Steve Ahuka-Mundeke & Placide Mbala-Kingebeni

Sample details

Collection date
2022-05-04
Collection date (lower bound)
2022-05-04
Collection date (upper bound)
2022-05-04
Collection subdivision level 1
Equateur
Isolate name
22MBK-089b
Collection country
Democratic Republic of the Congo

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-09-17 22:07eddylusamakiRESTRICTED until 2026-09-11
Data use terms URL

Authors

Author affiliations
Institut National de Recherche Biomédicale

Host

Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
18531
Total SNPs
262
Total inserted nucs
0
Total deleted nucs
1
Total ambiguous nucs
0
Total unknown nucs
279
Total frame shifts
0
Completeness
96.28%

Submission details

Submission ID
22MBK-089b_2022-05-04_COD_Mbandaka
Submitting group
Date submitted
2025-09-17 22:07:27 UTC
Date released
2025-09-17 22:07:53 UTC
Earliest release date
2025-09-17

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • G381A
  • A388G
  • T433C
  • A491G
  • G500A
  • A619G
  • A622G
  • C856T
  • C1094T
  • T1156C
  • C1198T
  • G1420A
  • T1540C
  • A1687G
  • C1945T
  • G1996A
  • T2019C
  • T2049C
    • Deletions
    18619
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002549.1 reference

    Substitutions

    GP

  • GP:V277I
  • GP:P279S
  • GP:V310A
  • GP:G314R
  • GP:D329N
  • GP:S377P
  • GP:L378P
  • GP:K395T
  • GP:A417T
  • GP:S422P
  • GP:P430L
  • GP:S440G
  • GP:F443L
  • GP:T449A
  • GP:Q467L
  • GP:S476G
  • GP:I544T

    • L

  • L:V79I
  • L:E130D
  • L:P342S
  • L:Y413H
  • L:I1183L
  • L:S1383N
  • L:R1405Q
  • L:F1610L
  • L:F1718Y
  • L:F1742S
  • L:D1888N
  • L:E2051D

    • NP

  • NP:I8V
  • NP:A11T
  • NP:I517T
  • NP:I527T
  • NP:T536A
  • NP:A540T
  • NP:T557I
  • NP:S644P
  • NP:E709D

    • VP24

  • VP24:M212K

    • VP35

  • VP35:M20V
  • VP35:N204D

    • sGP

  • sGP:V277I
  • sGP:P279S

    • ssGP

  • ssGP:V277I
  • ssGP:P279S
    • Deletions
    None
    Insertions
    None

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