PP_003V5KW.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Democratic_Republic_of_the_Congo/PP_003V5KW.1/2021-03-01
Daniel Mukadi-Bamuleka, Adrienne Amuri-Aziza, Michel Ngimba, Brigitte Modadra, Gradi Luakanda - Ndelemo, Prince Akil-Bandali, Francisca Muyembe-Mawete, Francois Edidi - Atani, Jean-Claude Makangara-Cigolo, Chloe Muswamba-Kayembe, Princesse Paku-Tshambu, Andre Citenga, Emmanuel Lokilo-Lofiko, Ola Rilia, Servet Kimbonza, Elisabeth Pukuta, Gabriel Kabamba -Lungenyi, Raphael Lumembe-Numbi, Catherine Pratt, Tony Wawina-Bokalanga, Eddy Kinganda-Lusamaki, Dieudonne Mumba - Ngoyi, Jean-Jacques Muyembe-Tamfum, Steve Ahuka-Mundeke & Placide Mbala-Kingebeni

Sample details

Collection date
2021-03-01
Collection date (lower bound)
2021-03-01
Collection date (upper bound)
2021-03-01
Collection subdivision level 1
Nord-Kivu
Isolate name
21BTB725
Collection country
Democratic Republic of the Congo

Data use terms

Data use terms
RESTRICTED

Data use terms history

ChangedUserData use terms
2025-09-17 22:07eddylusamakiRESTRICTED until 2026-09-11
Data use terms URL

Authors

Author affiliations
Institut National de Recherche Biomédicale

Host

Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
18562
Total SNPs
289
Total inserted nucs
6
Total deleted nucs
2
Total ambiguous nucs
0
Total unknown nucs
594
Total frame shifts
1
Frame shifts
GP:423-677(nt:7302-8068)
Completeness
94.75%

Submission details

Submission ID
21BTB725_2021-03-01_COD_Butembo
Submitting group
Date submitted
2025-09-17 22:07:27 UTC
Date released
2025-09-17 22:07:53 UTC
Earliest release date
2025-09-17

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • C339T
  • G381A
  • A388G
  • T445A
  • A491G
  • C493T
  • G500A
  • G507A
  • A547G
  • C559T
  • A607C
  • A619G
  • C751T
  • C775T
  • A931C
  • C973T
  • C1072T
  • C1198T
    • Deletions
    7301, 18404
    Insertions
    ins_18632:TCCTTA

    Amino acid mutations

    Mutations called relative to the NC_002549.1 reference

    Substitutions

    GP

  • GP:V3A
  • GP:V75A
  • GP:V310A
  • GP:L368P
  • GP:S377P

    • L

  • L:V79I
  • L:E130D
  • L:Q133H
  • L:V229I
  • L:T233N
  • L:S428N
  • L:E539K
  • L:V1597A
  • L:F1610L
  • L:R1657G
  • L:R1681S
  • L:N1739S
  • L:F1742S
  • L:G1753S
  • L:Q1793R
  • L:I1824M
  • L:R1914K
  • L:T2028M
  • L:C2050S
  • L:E2051D

    • NP

  • NP:I8V
  • NP:A11T
  • NP:S13N
  • NP:V459I
  • NP:N478S
  • NP:T503I
  • NP:D576Y
  • NP:T579A
  • NP:S644P

    • VP24

  • VP24:K15Q
  • VP24:T34A
  • VP24:K163Q
  • VP24:I181L
  • VP24:M212K

    • VP35

  • VP35:A13V
  • VP35:Y55H
  • VP35:A56V
  • VP35:I78M
  • VP35:A180T
  • VP35:N204D

    • VP40

  • VP40:N23K
  • VP40:G29S
  • VP40:T255A
  • VP40:T277N

    • sGP

  • sGP:V3A
  • sGP:V75A
  • sGP:G331V

    • ssGP

  • ssGP:V3A
  • ssGP:V75A
    • Deletions
    GP:422
    Insertions
    None

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