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Status
PP_003V5BD.1
Download
Download FASTA
Download metadata TSV
Restricted-Use sequence
This sequence is only available under the
Restricted Use Terms
. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.
Display Name: Democratic_Republic_of_the_Congo/PP_003V5BD.1/2021-10-16
Adrienne Amuri-Aziza,
Emmanuel Lokilo-Lofiko,
Gradi Luakanda - Ndelemo,
Prince Akil-Bandali,
Francisca Muyembe-Mawete,
Francois Edidi - Atani,
Jean-Claude Makangara-Cigolo,
Chloe Muswamba-Kayembe,
Princesse Paku-Tshambu,
Andre Citenga,
Ola Rilia,
Servet Kimbonza,
Elisabeth Pukuta,
Daniel Mukadi-Bamuleka,
Gabriel Kabamba -Lungenyi,
Raphael Lumembe-Numbi,
Catherine Pratt,
Tony Wawina-Bokalanga,
Eddy Kinganda-Lusamaki,
Dieudonne Mumba - Ngoyi,
Jean-Jacques Muyembe-Tamfum,
Steve Ahuka-Mundeke &
Placide Mbala-Kingebeni
Sample details
Collection date
2021-10-16
Collection date (lower bound)
2021-10-16
Collection date (upper bound)
2021-10-16
Collection subdivision level 1
Nord-Kivu
Isolate name
21BEN114
Collection country
Democratic Republic of the Congo
Data use terms
Data use terms
RESTRICTED
✕
Data use terms history
Changed
User
Data use terms
2025-09-17 22:07
eddylusamaki
RESTRICTED until 2026-09-11
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/restricted-data
Authors
Author affiliations
Institut National de Recherche Biomédicale
Host
Host name - scientific
Homo sapiens
Alignment and QC metrics
Length
18862
Total SNPs
309
Total inserted nucs
6
Total deleted nucs
1
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
99.46%
Submission details
Submission ID
21BEN114_2021-10-16_COD_Beni-Butsili
Submitting group
Pathogen Genomic Lab
Date submitted
2025-09-17 22:07:27 UTC
Date released
2025-09-17 22:07:53 UTC
Earliest release date
2025-09-17
Nucleotide mutations
Mutations called relative to the
NC_002549.1
reference
Substitutions
A
214
G
C
230
T
T
246
C
C
339
T
G
381
A
A
388
G
T
445
A
A
491
G
C
493
T
G
500
A
G
507
A
A
547
G
C
559
T
A
607
C
A
619
G
C
751
T
C
775
T
A
931
C
Show more
Deletions
18404
Insertions
ins_18632:TCCTTA
Amino acid mutations
Mutations called relative to the
NC_002549.1
reference
Substitutions
GP
GP:
V
3
A
GP:
V
75
A
GP:
F
248
L
GP:
V
310
A
GP:
L
368
P
GP:
S
377
P
GP:
S
422
P
GP:
P
429
A
GP:
A
432
T
GP:
T
435
A
GP:
F
443
L
GP:
E
457
K
GP:
K
478
R
GP:
I
544
T
L
L:
V
79
I
L:
E
130
D
L:
Q
133
H
L:
T
233
N
L:
S
428
N
L:
E
539
K
L:
S
1383
N
L:
V
1597
A
L:
F
1610
L
L:
R
1657
G
L:
R
1681
S
L:
N
1739
S
L:
F
1742
S
L:
G
1753
S
L:
Q
1793
R
L:
I
1824
M
L:
R
1914
K
L:
T
2028
M
L:
C
2050
S
L:
E
2051
D
NP
NP:
I
8
V
NP:
A
11
T
NP:
S
13
N
NP:
V
459
I
NP:
N
478
S
NP:
T
503
I
NP:
I
517
T
NP:
T
522
A
NP:
I
527
T
NP:
A
540
D
NP:
N
547
H
NP:
D
548
N
NP:
S
644
P
VP24
VP24:
K
15
Q
VP24:
T
34
A
VP24:
K
163
Q
VP24:
M
212
K
VP35
VP35:
A
13
V
VP35:
Y
55
H
VP35:
A
56
V
VP35:
Q
61
K
VP35:
I
78
M
VP35:
A
180
T
VP35:
N
204
D
VP40
VP40:
N
23
K
VP40:
G
29
S
VP40:
T
255
A
VP40:
T
277
N
sGP
sGP:
V
3
A
sGP:
V
75
A
sGP:
F
248
L
sGP:
G
331
V
sGP:
L
336
P
ssGP
ssGP:
V
3
A
ssGP:
V
75
A
ssGP:
F
248
L
Deletions
None
Insertions
None
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