PP_003RQ6C.1

USA/PP_003RQ6C.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-01 09:19insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
II
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30
Raw reads accession

Submission details

Submission ID
OK573092.1
Submitting group
Date submitted
2025-09-01 09:18:58 UTC
Date released
2026-03-03 18:03:06 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
449 (0.357%)
# of SNPs
6
# of deleted bases
255

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • A160645T
  • A160832G
  • A160867G
  • A160941T
  • A161195G
  • T161257C
Deletions

160570-160638, 160646-160831
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG187

  • OPG187:I66F
  • OPG187:D107V
  • OPG187:N192D
Deletions

OPG187

OPG187:68-71
Insertions
N/A

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