PP_003RPR8.1

USA/PP_003RPR8.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-01 09:19insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
IIa
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30
Raw reads accession

Submission details

Submission ID
OK573038.1
Submitting group
Date submitted
2025-09-01 09:18:58 UTC
Date released
2026-03-03 18:03:06 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
1032 (0.533%)
# of SNPs
7
# of deleted bases
19
# of frame shifts
1
# of stop codons
1
Frame shifts
OPG091:78-166(nt:71599-71867)
Stop Codons
OPG091:70

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • T71570G
  • A71576G
  • G71577T
  • T71897G
  • T71901G
  • C71902A
  • G71925A
Deletions

71580-71598
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG091

  • OPG091:F67L
  • OPG091:G70*

OPG092

  • OPG092:G349V
  • OPG092:N351H
Deletions

OPG091

OPG091:71-77
Insertions
N/A

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