PP_003RPQA.1

USA/PP_003RPQA.1
N. Shashan, J. Makarenko, L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Sampling location
USA (MD)
Isolate name
USA-2003

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-01 09:19insdc_ingest_userOPEN
Data use terms URL

Clade & Lineage

Clade
unassigned
Outbreak
None
Lineage
None

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2022-07-30
NCBI update date
2022-07-30
Raw reads accession

Submission details

Submission ID
OK573037.1
Submitting group
Date submitted
2025-09-01 09:18:58 UTC
Date released
2026-03-03 18:03:06 UTC
Earliest release date
2022-07-30

Alignment and QC

Length
1122 (0.621%)
# of SNPs
2
# of deleted bases
103
# of frame shifts
1
Frame shifts
OPG132:316-373(nt:112422-112595)

Nucleotide mutations

Mutations called relative to the NC_063383.1 reference

Substitutions

  • A112632G
  • T112634G
Deletions

112524-112591, 112596-112630
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_063383.1 reference

Substitutions

OPG132

  • OPG132:I303L
Deletions

OPG132

OPG132:305-315
Insertions
N/A

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