PP_003GKSV.1

Japan/PP_003GKSV.1/2025-05-06
S. Watanabe, T. Motoya, M. Matsuzaki, S. Osawa, S. Tsuboyama, A. Okubo & K. Komuro

Laboratory of virology; 993-2 Kasaharacho, Mito, Ibaraki 310-0852

Sample details

Collection date
2025-05-06
Sampling location
Japan (Ibaraki)
Isolate name
MVs/Ibaraki.JPN/18.25/3[B3]

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-08-27 15:16insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
B3

INSDC

INSDC accession
NCBI release date
2025-08-07
NCBI update date
2025-08-07

Host

Host

Submission details

Submission ID
LC886157.1
Submitting group
Date submitted
2025-08-27 15:15:27 UTC
Date released
2025-08-27 15:24:17 UTC
Earliest release date
2025-08-07

Alignment and QC

Length
450 (2.83%)
# of SNPs
37

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • C1253T
  • C1271T
  • T1328C
  • G1334A
  • C1337T
  • A1387G
  • A1394G
  • A1397G
  • G1398A
  • C1409T
  • A1415G
  • T1418C
  • G1434A
  • G1435A
  • T1436C
  • G1439A
  • G1441A
  • A1449C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

N

  • N:N427S
  • N:G431R
  • N:G443N
  • N:G445E
  • N:Y451H
  • N:G455E
  • N:S456P
  • N:A462V
  • N:M471T
  • N:S481F
  • N:G482S
  • N:L505S
  • N:G509D
Deletions
N/A
Insertions
N/A

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