PP_0031W7K.1

Display Name: Tunisia/PP_0031W7K.1/2024
S. Fabi, G. Di Pietra, E. Valente, M. Bellato, C. Agostini, M. Paccagnella, E. Franchin, V. Chisu, C. Foxi, C. Del Vecchio, I. Castagliuolo, G. Masala & C. Salata

Submission details

Submission ID
PV920628.1.S
Submitting group
Date submitted
2025-08-02 04:28:20 UTC
Date released
2025-08-02 04:28:54 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-08-02 04:28insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Padova, Molecular Medicine

Alignment and QC metrics S

Completeness S
39.77%
Length S
665
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
124
Total unknown nucs S
0

Sample details

Earliest release date
2025-07-23
Collection country
Tunisia
Collection date
2024
Collection date (lower bound)
2024-01-01
Collection date (upper bound)
2024-12-31
Isolate name
CCHFV/TUN/REM/2024/60A

Host

Host name - scientific
Hyalomma sp.
Host taxon ID

INSDC

INSDC accession S
NCBI release date
2025-07-23

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:T799G
  • S:A802G
  • S:A808G
  • S:T814G
  • S:G820A
  • S:C829G
  • S:G831A
  • S:T835C
  • S:G838C
  • S:G844A
  • S:T847C
  • S:G850A
  • S:C853T
  • S:A856G
  • S:T859A
  • S:T862C
  • S:G864A
  • S:A865G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:D248E
  • NP:N258K
  • NP:G259E
  • NP:R270K
  • NP:I277V
  • NP:A285T
  • NP:S301G
  • NP:A307P
  • NP:Y311F
  • NP:T420S
  • NP:N442H
  • NP:V449G
  • NP:A450G
  • NP:L454P
  • NP:L455V
  • NP:H456D
  • NP:V460G
    • Deletions
    None
    Insertions
    None

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