PP_0031TUD.1

Display Name: Japan/PP_0031TUD.1/2025-05-26
K. Kuroki

Submission details

Submission ID
LC880204.1
Submitting group
Date submitted
2025-07-05 04:34:33 UTC
Date released
2025-07-05 04:34:55 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-05 04:34insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Department of Microbiology; 3-24-1 Hyakunin-cho, Shinjuku-ku, Tokyo 169-0073

Alignment and QC metrics

Completeness
8.16%
Frame shifts
N:378-395(nt:1171-1224)
Length
1094
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
1
Total inserted nucs
5
Total SNPs
161
Total unknown nucs
0

Sample details

Earliest release date
2025-07-04
Collection subdivision level 1
Tokyo
Collection country
Japan
Collection date
2025-05-26
Collection date (lower bound)
2025-05-26
Collection date (upper bound)
2025-05-26
Isolate name
hMPV_B2/N/F25-412/Tokyo/2025

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2025-07-04
NCBI update date
2025-07-04

Lineage

Lineage
B2

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

  • G126A
  • T129C
  • A132C
  • C150T
  • A162G
  • A168G
  • G177T
  • A189G
  • G195T
  • T198C
  • G199A
  • G208A
  • C213T
  • A231G
  • A250T
  • A255G
  • T259C
  • G270A
    • Deletions
    None
    Insertions
    ins_1170:AAGAA

    Amino acid mutations

    Mutations called relative to the NC_039199.1 reference

    Substitutions

    N

  • N:A54T
  • N:A57T
  • N:S71C
  • N:R96K
  • N:I103G
  • N:N106S
  • N:D110E
  • N:A136V
  • N:M201V
  • N:D212E
  • N:H220Y
  • N:K356R
    • Deletions
    None
    Insertions
    None

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