PP_0031TLV.1

Display Name: Japan/PP_0031TLV.1/2025-04-22
K. Kuroki

Submission details

Submission ID
LC880196.1
Submitting group
Date submitted
2025-07-05 04:34:33 UTC
Date released
2025-07-05 04:34:55 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-05 04:34insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Department of Microbiology; 3-24-1 Hyakunin-cho, Shinjuku-ku, Tokyo 169-0073

Alignment and QC metrics

Completeness
8.16%
Frame shifts
N:368-395(nt:1140-1224)
Length
1087
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
1
Total inserted nucs
0
Total SNPs
89
Total unknown nucs
0

Sample details

Earliest release date
2025-07-04
Collection subdivision level 1
Tokyo
Collection country
Japan
Collection date
2025-04-22
Collection date (lower bound)
2025-04-22
Collection date (upper bound)
2025-04-22
Isolate name
hMPV_A2b1/N/F25-154/Tokyo/2025

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2025-07-04
NCBI update date
2025-07-04

Lineage

Lineage
A2.2.1

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

  • G126A
  • T129C
  • T138A
  • G144A
  • A186G
  • G195A
  • A204G
  • G208A
  • C213T
  • T259C
  • A264G
  • T265A
  • G276A
  • G288A
  • G291A
  • G313A
  • T314C
  • C318T
    • Deletions
    1138, 1139
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_039199.1 reference

    Substitutions

    N

  • N:A57T
  • N:S76T
  • N:V92T
  • N:I103V
    • Deletions
    N:367
    Insertions
    None

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