PP_003136E.1

Display Name: Spain/PP_003136E.1/2025-05-02
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Submission details

Submission ID
hRSV/B/Spain/CT-HUGTiP324167/2025
Submitting group
Date submitted
2025-06-30 13:08:40 UTC
Date released
2025-06-30 13:09:53 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-06-30 13:08agonzalezOPEN
Data use terms URL

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

BioProject accession
BioSample accession
INSDC accession

Alignment and QC metrics

Completeness
99.81%
Length
15204
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
11
Total SNPs
153
Total unknown nucs
1

Sample details

Earliest release date
2025-06-30
Collection subdivision level 1
Catalonia
Collection country
Spain
Collection date
2025-05-02
Collection date (lower bound)
2025-05-02
Collection date (upper bound)
2025-05-02

Lineage

Lineage
B.D.4.1.1

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G27A
  • C212T
  • G513T
  • C564T
  • G579A
  • T707C
  • G955A
  • T1022C
  • G1385A
  • C1714A
  • G1732A
  • T1846C
  • G1963A
  • A1984T
  • C1996T
  • C2074T
  • C2198T
  • C2484T
    • Deletions
    4586
    Insertions
    ins_3204:GAAAGAA, ins_15092:ATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:K176R
  • F:S190N
  • F:R209Q
  • F:S211N

    • G

  • G:A74I
  • G:K85E
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I268T
  • G:N291S

    • L

  • L:K570R
  • L:M646L
  • L:T1621I
  • L:M1741I
  • L:R1759K
  • L:R1872K
  • L:T1987I

    • M2-1

  • M2-1:S179P

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:C49F
  • M2-2:P79L

    • N

  • N:V97I

    • P

  • P:T72A
    • Deletions
    None
    Insertions
    None

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