PP_0030DBW.1

Display Name: Spain/PP_0030DBW.1/2025-04-04
Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Elena Dima, Maria Carmen Martin, Tomas Pumarola & Andres Anton

Submission details

Submission ID
hRSV/A/Spain/CT-HUJO003493/2025
Submitting group
Date submitted
2025-06-30 12:59:16 UTC
Date released
2025-06-30 13:00:51 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-06-30 12:59agonzalezOPEN
Data use terms URL

Authors

Author affiliations
Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

INSDC

BioProject accession
BioSample accession
INSDC accession

Alignment and QC metrics

Completeness
99.82%
Length
15199
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
3
Total SNPs
215
Total unknown nucs
0

Sample details

Earliest release date
2025-06-30
Collection subdivision level 1
Catalonia
Collection country
Spain
Collection date
2025-04-04
Collection date (lower bound)
2025-04-04
Collection date (upper bound)
2025-04-04

Lineage

Lineage
A.D.3

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T59C
  • T66A
  • C75A
  • C90T
  • C183T
  • G192A
  • G587T
  • C589T
  • C983A
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • T1359C
  • A1361G
  • T1413A
  • T1422C
  • C1788T
    • Deletions
    4592
    Insertions
    ins_3154:A, ins_15115:TT

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:T12I
  • F:A23T
  • F:K123R

    • G

  • G:A57T
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:S243I
  • G:T245A
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:D284G
  • G:P298L

    • L

  • L:N37D
  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:S1593G
  • L:N1723S
  • L:G1731D
  • L:K2064R
  • L:T2069A

    • M2-1

  • M2-1:S176P

    • M2-2

  • M2-2:Y26C
  • M2-2:S46N
  • M2-2:D64G
  • M2-2:T79A

    • N

  • N:K84R
  • N:V352A

    • P

  • P:L55P
  • P:T92M

    • SH

  • SH:A60T
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue