Display Name: Croatia/PP_002YX12.1/2024-08-13
T. Vilibic-Cavlek, L. Barbic, A. Klobucar, M. Vucelja, M. Bogdanic, D. Sabadi, M. Kutlesa, B. Gjurasin, V. Stevanovic, M. Curman Posavec, L. Bjedov, M. Boljfetic, T. Jozic-Novinc, R. Skara, M. Tomljenovic, Z. Hruskar, M. Al-Mufleh, T. Potocnik-Hunjadi, I. Roncevic & V. Savic

Submission details

Submission ID
PV737702.1
Date submitted
2025-06-24 02:54:47 UTC
Date released
2025-06-24 02:55:02 UTC

Data use terms

Data use terms
OPEN

Authors

Author affiliations
Croatian Veterinary Institute, Poultry Center

Alignment and QC metrics

Completeness
7.92%
Length
874
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
177
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2025-06-23
Collection subdivision level 1
Sisak
Collection country
Croatia
Collection date
2024-08-13
Collection date (lower bound)
2024-08-13
Collection date (upper bound)
2024-08-13
Isolate name
WNV/HR/human/965/2024

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2025-06-23
NCBI update date
2025-06-23

Lineage

Lineage
2

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • T9204A
  • C9207T
  • G9210A
  • G9216A
  • C9219A
  • C9220T
  • C9222G
  • A9225G
  • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS5

  • NS5:R522K
  • NS5:R527K
  • NS5:R546K
  • NS5:A569S
  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
  • Deletions
    None
    Insertions
    None

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