PP_002YSH8.1

Display Name: USA/PP_002YSH8.1/2025-04-08
A. S. Lauring & L. K. Papalambros

Submission details

Submission ID
PV719541.1
Submitting group
Date submitted
2025-06-15 03:05:22 UTC
Date released
2025-06-15 03:06:01 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-06-15 03:05insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease

INSDC

BioProject accession
INSDC accession
NCBI release date
2025-06-14
NCBI update date
2025-06-14

Alignment and QC metrics

Completeness
83.57%
Length
14893
Total ambiguous nucs
2
Total deleted nucs
4
Total frame shifts
0
Total inserted nucs
0
Total SNPs
204
Total unknown nucs
2171

Sample details

Earliest release date
2025-06-14
Collection country
USA
Collection date
2025-04-08
Collection date (lower bound)
2025-04-08
Collection date (upper bound)
2025-04-08
Isolate name
hRSV-A-G25Y95Z5

Host

Host name - scientific
Homo sapiens
Host taxon ID

Lineage

Lineage
A.D.5.2

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • C183T
  • T246C
  • A940C
  • A979C
  • A1009G
  • C1012T
  • A1021G
  • T1028C
  • G1050A
  • A1051C
  • A1078G
  • A1087G
  • G1248A
  • T1254C
  • T1281C
    • Deletions
    4592, 7516-7518
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:I59V
  • F:A103T
  • F:T122A
  • F:N124T
  • F:A518V

    • G

  • G:L101F
  • G:I134K
  • G:Q140R
  • G:P206Q
  • G:K209R
  • G:G224E
  • G:K229R
  • G:T235I
  • G:S243I
  • G:L248I
  • G:K262E
  • G:I265L
  • G:D284G
  • G:V303A
  • G:Y304H
  • G:L310P
  • G:S315P
  • G:S317F
  • G:T319I
  • G:T320A

    • L

  • L:P171L
  • L:R256K
  • L:L1438Q
  • L:S1452G
  • L:E1725G
  • L:G1731D
  • L:V1943D

    • M

  • M:M73L

    • M2-1

  • M2-1:S176P

    • M2-2

  • M2-2:S46N

    • N

  • N:V352A

    • P

  • P:L55P
  • P:T69I
    • Deletions
    None
    Insertions
    None

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