PP_002Y8T6.1

Display Name: Japan/PP_002Y8T6.1/2014-11-20
H. Okabe, K. Hashimoto, S. Norito, Y. Asano, M. Sato, Y. Kume, M. Chishiki, H. Maeda, F. Mashiyama, A. Takeyama, H. Murai, K. Nemoto, M. Ito, S. Suzuki, H. Sakuma, K. Shirato, H. Go, M. Hosoya, T. Ono, J. Shirota, S. Hiruta, E. Shima & M. Watanabe

Sample details

Collection date
2014-11-20
Country
Japan
Admin level 1
Fukushima
Isolate name
FRS64

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-06-05 10:42insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.2

Authors

Author affiliations
Department of Pediatrics; 1 Hikarigaoka, Fukushima city, Fukushima 9601295

INSDC

INSDC accession
NCBI release date
2025-06-04
NCBI update date
2025-06-04

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
949
Completeness
6.23%
# of SNPs
5
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
LC877558.1
Submitting group
Date submitted
2025-06-05 10:42:01 UTC
Date released
2025-06-05 10:42:25 UTC
Earliest release date
2025-06-04

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C5917T
  • C6059T
  • T6329C
  • A6511T
  • T6668C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:A74V
  • F:K272M
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue