PP_002Y07M.1

Display Name: Ireland/PP_002Y07M.1/2025-04-16
Carr, Michael; Bennett, Charlene; Banka, Weronika; Fahey, Laura; Rice, Alan; Dean, Jonathan; Hare, Daniel; De Gascun, Cillian F.

Submission details

Submission ID
hRSV/B/Ireland/un-NVRL-GIRL00031962/2025
Submitting group
Date submitted
2025-05-28 16:08:34 UTC
Date released
2025-05-28 16:09:18 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-05-28 16:08alanriceOPEN
Data use terms URL

Authors

Author affiliations
National Virus Reference Laboratory, University College Dublin, Dublin, Ireland

INSDC

BioProject accession
BioSample accession
INSDC accession

Alignment and QC metrics

Completeness
99.88%
Length
15205
Total ambiguous nucs
0
Total deleted nucs
5
Total frame shifts
0
Total inserted nucs
7
Total SNPs
138
Total unknown nucs
0

Sample details

Earliest release date
2025-05-28
Collection country
Ireland
Collection date
2025-04-16
Collection date (lower bound)
2025-04-16
Collection date (upper bound)
2025-04-16

Host

Host name - scientific
Homo sapiens

Lineage

Lineage
B.D.E.1

Sequencing

Sequencing instrument
Illumina NextSeq 1000 [GENEPIO:0004432]

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • G579A
  • C984T
  • C998A
  • T1250C
  • A1315G
  • A1336T
  • G1385A
  • G1648A
  • G1732A
  • T1846C
  • A1984G
  • C2074T
  • C2198T
  • T2406C
  • T2457C
  • C2521T
  • C2554T
    • Deletions
    973, 4586, 13501-13503
    Insertions
    ins_15092:ATAT, ins_3204:GAA

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P140L
  • G:N144D
  • G:P214S
  • G:P221L
  • G:I252T
  • G:S255P
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

    • L

  • L:Y125C
  • L:K570R
  • L:R1759K
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I

    • P

  • P:P73S
    • Deletions
    L:1662
    Insertions
    None

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