PP_002XQ1B.1

Display Name: Kazakhstan/PP_002XQ1B.1/2024-01-01
Maxat, B. M. A.; Gulzhan, M. G. K.; Kydyrbay, M. K. T.; Serik, S. S. K.; Balzhan, K. B. A.; Botagoz, N. B. R.

Submission details

Submission ID
PV646618.1.L/PV646617.1.S
Submitting group
Date submitted
2025-05-28 12:35:18 UTC
Date released
2025-05-28 12:35:51 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-05-28 12:35insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Kazakh Scientific Research Veterinary Institute

Alignment and QC metrics L

Completeness L
4.36%
Length L
528
Total ambiguous nucs L
0
Total deleted nucs L
0
Total frame shifts L
0
Total inserted nucs L
0
Total SNPs L
88
Total unknown nucs L
0

Alignment and QC metrics S

Completeness S
28.95%
Length S
484
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
72
Total unknown nucs S
0

Sample details

Earliest release date
2025-05-21
Collection subdivision level 1
Turkestan, Arys
Collection country
Kazakhstan
Collection date
2024
Collection date (lower bound)
2024-01-01
Collection date (upper bound)
2024-12-31
Isolate name
KAZ/154/2025

Host

Host name - scientific
Ixodoidea
Host taxon ID

INSDC

INSDC accession L
INSDC accession S
NCBI release date
2025-05-21

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • L:A526G
  • L:C529T
  • L:T535C
  • L:G538T
  • L:C541T
  • L:T550G
  • L:G553A
  • L:A563G
  • L:A565T
  • L:A571G
  • L:G578A
  • L:G583A
  • L:C586T
  • L:G589A
  • L:A590G
  • L:C595T
  • L:G597A
  • L:T601C

    • S

  • S:T157C
  • S:C166T
  • S:G171A
  • S:C178A
  • S:A180G
  • S:T182C
  • S:G190A
  • S:G196A
  • S:C217T
  • S:G229A
  • S:C235T
  • S:T250A
  • S:G256A
  • S:A268C
  • S:G271A
  • S:T277C
  • S:T283C
  • S:T289C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:S39N
  • NP:N42S
  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H

    • RdRp

  • RdRp:T163A
  • RdRp:A168T
  • RdRp:M172V
  • RdRp:R174K
  • RdRp:S205P
  • RdRp:N206Y
  • RdRp:T215A
  • RdRp:K275R
  • RdRp:I279V
    • Deletions
    None
    Insertions
    None

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