PP_002X0RL.1

China/B-16S212/2016-10-10
Y. Yu, X. Yu, F. Cao, X. Zheng, L. Ao, S. Cheng, X. Qiu, Y. Zhou & J. Li

Hangzhou Center for Disease Control and Prevention (Hangzhou Health Supervision Institution), Department of Microbiology Laboratory

Sample details

Collection date
2016-10-10
Sampling location
China
Isolate name
B-16S212

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.4.1

INSDC

INSDC accession
NCBI release date
2025-04-02
NCBI update date
2025-04-02

Host

Host

Submission details

Submission ID
PV367352.1
Submitting group
Date submitted
2025-05-22 14:46:10 UTC
Date released
2025-05-22 14:59:29 UTC
Earliest release date
2025-04-02

Alignment and QC

Length
15222 (100%)
# of SNPs
101

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • C389A
  • G513T
  • T577C
  • G579A
  • T592C
  • T791C
  • G1216T
  • G1385A
  • T1846C
  • G1978A
  • C2198T
  • T2457C
  • T2529C
  • C2679T
  • C2886T
  • C3067T
  • C3082T
  • A3106G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:Q113R
  • F:R191K
  • F:N201S
  • F:M206I
  • F:R209Q

G

  • G:A74V
  • G:T131A
  • G:I137T
  • G:N154K
  • G:L217P
  • G:I252T
  • G:Y285H
  • G:I288T
  • G:I310T

L

  • L:V179I
  • L:A1479V
  • L:V1716I
  • L:T1987I

M2-2

  • M2-2:I2T

N

  • N:V97I

SH

  • SH:D64N
Deletions
N/A
Insertions
N/A

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