PP_002WU6Z.1

USA/MN-MDH-RSVB-02082/2025-02-03
H. D. Kunerth, M. Plumb, S. Namugenyi, D. Evans, L. Bohnkers-Voels & A. Strain

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2025-02-03
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-02082

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2025-03-10
NCBI update date
2025-03-10
Raw reads accession

Host

Host

Submission details

Submission ID
PV211796.1
Submitting group
Date submitted
2025-05-22 14:46:10 UTC
Date released
2025-05-22 14:59:29 UTC
Earliest release date
2025-03-10

Cited in

Alignment and QC

Length
15139 (95.2%)
# of SNPs
138
# of inserted bases
3
# of deleted bases
2
# of unknown bases
644

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • G513T
  • C578T
  • G579A
  • C984T
  • C998A
  • C1204T
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • G2585A
  • C2691T
  • G3036C
  • G3050A
  • C3051T
  • A3060G
Deletions
973, 4586
Insertions
ins_3112:C, ins_15092:AT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:N208S
  • F:S211N
  • F:S389P

G

  • G:T70S
  • G:A74V
  • G:S100G
  • G:H112Y
  • G:P214S
  • G:P221L
  • G:T225P
  • G:V249A
  • G:I252T
  • G:S255P
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:N176S
  • L:S560P
  • L:K570R
  • L:V1721I
  • L:R1759K
  • L:I1832V
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

P

  • P:S94N
Deletions
N/A
Insertions
N/A

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