PP_002VZNX.1

Display Name: Panama/PP_002VZNX.1/2020-02-21
D. Franco, S. Goya, A. Martinez, B. Moreno, E. Valdespino, M. Gaitan, C. Gonzalez, A. Moreno, Z. Capitan-Barrios, J. P. Carrera, S. Lopez-Verges, J. M. Pascale, S. R. Das, J. Arbiza, A. Delfraro & L. Abrego

Sample details

Collection date
2020-02-21
Country
Panama
Isolate name
hRSV/B/Panama/ICGES-146/2020

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
Gorgas Memorial Institute of Health Studies, Department of Research in Virology and Biotechnology

INSDC

INSDC accession
NCBI release date
2024-11-25
NCBI update date
2024-11-25

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
15212
Completeness
99.93%
# of SNPs
59
# of inserted bases
2
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
PQ618100.1
Submitting group
Date submitted
2025-05-22 14:46:10 UTC
Date released
2025-05-22 14:58:57 UTC
Earliest release date
2024-11-25

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • G513T
  • G579A
  • T808C
  • C962T
  • G1385A
  • T1846C
  • A2003G
  • C2198T
  • C2964T
  • C3067T
  • C3082T
  • C3146T
  • C3180T
  • G3438T
  • C3992T
  • T4031C
    • Deletions
    4586
    Insertions
    ins_0:AA

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:K68N

    • G

  • G:A74V
  • G:T106K
  • G:T272A

    • L

  • L:V179A
  • L:T1987I

    • M2-2

  • M2-2:I2T

    • N

  • N:V97I
  • N:I303V
    • Deletions
    None
    Insertions
    None

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