PP_002VZNX.1

Panama/PP_002VZNX.1/2020-02-21
D. Franco, S. Goya, A. Martinez, B. Moreno, E. Valdespino, M. Gaitan, C. Gonzalez, A. Moreno, Z. Capitan-Barrios, J. P. Carrera, S. Lopez-Verges, J. M. Pascale, S. R. Das, J. Arbiza, A. Delfraro & L. Abrego

Gorgas Memorial Institute of Health Studies, Department of Research in Virology and Biotechnology

Sample details

Collection date
2020-02-21
Sampling location
Panama
Isolate name
hRSV/B/Panama/ICGES-146/2020

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

INSDC

INSDC accession
NCBI release date
2024-11-25
NCBI update date
2024-11-25

Host

Host

Submission details

Submission ID
PQ618100.1
Submitting group
Date submitted
2025-05-22 14:46:10 UTC
Date released
2025-05-22 14:58:57 UTC
Earliest release date
2024-11-25

Alignment and QC

Length
15212 (99.9%)
# of SNPs
59
# of inserted bases
2
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • G513T
  • G579A
  • T808C
  • C962T
  • G1385A
  • T1846C
  • A2003G
  • C2198T
  • C2964T
  • C3067T
  • C3082T
  • C3146T
  • C3180T
  • G3438T
  • C3992T
  • T4031C
Deletions

4586
Insertions

ins_0:AA

Amino acid mutations

Mutations called relative to the OP975389.1 reference

Substitutions

F

  • F:K68N

G

  • G:A74V
  • G:T106K
  • G:T272A

L

  • L:V179A
  • L:T1987I

M2-2

  • M2-2:I2T

N

  • N:V97I
  • N:I303V
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue