PP_002VX8U.1

Display Name: China/PP_002VX8U.1/2013-11
Y. Sun

Sample details

Collection date
2013-11
Country
China
Isolate name
5683

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4

Authors

Author affiliations
Xiamen University, School of Public Health

INSDC

INSDC accession
NCBI release date
2024-11-06
NCBI update date
2024-11-06

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
855
Completeness
5.62%
# of SNPs
15
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
PQ538825.1
Submitting group
Date submitted
2025-05-22 14:46:10 UTC
Date released
2025-05-22 14:58:26 UTC
Earliest release date
2024-11-06

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A5737G
  • T5762C
  • T5903A
  • T5948A
  • C5991A
  • C6017T
  • A6161G
  • C6192T
  • T6193C
  • G6247A
  • A6277G
  • G6293A
  • C6300A
  • G6301A
  • G6329A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:Y21C
  • F:L173S
  • F:R191K
  • F:N201S
  • F:M206I
  • F:R209K
    • Deletions
    None
    Insertions
    None

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