PP_002TU81.1

Spain/PP_002TU81.1/2019-11-08
A. C. Langedijk, R. J. Lebbink, L. J. Bont & A. Evers

UMC Utrecht, Paediatric Infectious Diseases

Sample details

Collection date
2019-11-08
Sampling location
Spain
Isolate name
340103002

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

INSDC

INSDC accession
NCBI release date
2024-04-09
NCBI update date
2024-04-09

Host

Host

Submission details

Submission ID
PP377139.1
Submitting group
Date submitted
2025-05-22 14:45:31 UTC
Date released
2025-05-22 14:56:53 UTC
Earliest release date
2024-04-09

Alignment and QC

Length
15224 (99.9%)
# of SNPs
58
# of inserted bases
14

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G1A
  • C3G
  • G579A
  • C643T
  • G1031A
  • G1385A
  • A1528G
  • T1846C
  • C2198T
  • A2263C
  • C3055T
  • C3082T
  • C3146T
  • C3180T
  • G3411A
  • T4043C
  • T4049C
  • T4058C
Deletions
N/A
Insertions

ins_0:ACACTCGAAAAAA, ins_4586:A

Amino acid mutations

Mutations called relative to the OP975389.1 reference

Substitutions

F

  • F:K68N

G

  • G:A74V
  • G:L217P
  • G:P221S
  • G:I227T
  • G:V249A
  • G:S265P
  • G:T274I
  • G:S307P

L

  • L:A1489T
  • L:G1649R
  • L:H1750Y

M2-2

  • M2-2:I2T

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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