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PP_002SUFP.1
Download
Download FASTA
Download metadata TSV
Germany/PP_002SUFP.1/2021-11-11
S. Kondgen &
J. Reiche
Robert Koch Institut
Sample details
Collection date
2021-11-11
Sampling location
Germany
Isolate name
hRSV/B/Germany/22-01489/2021
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
B.D.E.1
INSDC
INSDC accession
OR795252.1
NCBI release date
2024-02-13
NCBI update date
2024-02-13
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OR795252.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-22 14:45:31 UTC
Date released
2025-05-22 14:55:49 UTC
Earliest release date
2024-02-13
Cited in
Mutational constraints on RSV F and its neutralization by antibodies (2026)
Cassandra AL Simonich, Teagan E McMahon, Gavin Juviler, Lucas Kampman, Helen Y Chu, Jesse D Bloom
From SeqSets:
PP_SS_628.1
(references PP_002SUFP)
,
PP_SS_662.1
(references PP_002SUFP.1)
Alignment and QC
Length
15218 (99.9%)
# of SNPs
111
# of inserted bases
7
# of deleted bases
2
Nucleotide mutations
Mutations called relative to the
OP975389.1
reference
Substitutions
A
211
G
G
513
T
G
579
A
C
998
A
T
1033
C
G
1385
A
G
1732
A
T
1846
C
C
2074
T
C
2198
T
C
2554
T
C
2691
T
C
2707
T
A
2775
T
A
3008
G
G
3036
C
A
3060
G
C
3082
T
Show more
Deletions
2, 3
Insertions
ins_0:AATG, ins_2284:A, ins_15092:AT
Amino acid substitutions
Substitutions called relative to the
OP975389.1
reference
Substitutions
F
F:
T
72
N
F:
S
190
N
F:
N
201
S
F:
S
211
N
F:
S
389
P
G
G:
A
74
V
G:
S
100
G
G:
T
131
A
G:
I
137
T
G:
P
214
S
G:
P
221
L
G:
I
252
T
G:
K
256
N
G:
I
268
T
G:
S
275
P
G:
Y
285
H
L
L:
K
570
R
L:
C
600
Y
L:
C
1184
Y
L:
R
1759
K
L:
T
1987
I
M2-2
M2-2:
I
2
T
M2-2:
M
27
T
M2-2:
D
35
N
M2-2:
C
49
F
N
N:
V
97
I
NS1
NS1:
N
52
S
P
P:
D
235
G
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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