PP_002N0UY.1

Display Name: Brazil/PP_002N0UY.1/2018-06-21
D. E. Tabor, F. Fernandes, A. C. Langedijk, D. Wilkins, R. J. Lebbink, A. Tovchigrechko, A. Ruzin, L. Kragten-Tabatabaie, H. Jin, M. T. Esser, L. J. Bont, M. E. Abram & D. Tabor

Sample details

Collection date
2018-06-21
Country
Brazil
Isolate name
550101010

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.4.1.1

Authors

Author affiliations
AstraZeneca, Microbial Sciences

INSDC

INSDC accession
NCBI release date
2021-10-30
NCBI update date
2021-10-30

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
2504
Completeness
16.44%
# of SNPs
22
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
1
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
OK299742.1
Submitting group
Date submitted
2025-05-22 14:45:31 UTC
Date released
2025-05-22 14:53:10 UTC
Earliest release date
2021-10-30

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A5172G
  • T5236C
  • A5254G
  • T5287C
  • A5517T
  • C5559T
  • T5574C
  • A5624G
  • T5709C
  • A6008C
  • C6017T
  • A6491T
  • G6502A
  • C6728T
  • C6731T
  • A7064T
  • A7148G
  • C7202T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12L
  • F:K272N
  • F:S276N
  • F:E463D

    • G

  • G:N176S
  • G:N291I
  • G:S305F
  • G:I310T
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue