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PP_002MEH8.1
Download
Download FASTA
Download metadata TSV
Display Name: Germany/PP_002MEH8.1/2009-02-10
S. Kondgen &
J. Reiche
Sample details
Collection date
2009-02-10
Country
Germany
Isolate name
GER/3432/08-09
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-05-22 14:46
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
B
Authors
Author affiliations
Robert Koch Insitut
INSDC
INSDC accession
MZ568998.1
NCBI release date
2024-02-13
NCBI update date
2024-02-13
Host
Host taxon ID
9606
Host name - scientific
Homo sapiens
Alignment and QC metrics
Length
15193
Completeness
100.00%
# of SNPs
455
# of inserted bases
32
# of deleted bases
61
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0
Submission details
Submission ID
MZ568998.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-22 14:45:31 UTC
Date released
2025-05-22 14:52:37 UTC
Earliest release date
2024-02-13
Nucleotide mutations
Mutations called relative to the
OP975389.1
reference
Substitutions
G
1
A
C
3
G
T
48
C
C
72
T
G
104
A
T
110
C
T
221
C
T
250
C
A
338
G
A
371
G
T
425
A
C
468
A
T
471
C
A
492
G
G
505
T
G
513
T
A
517
G
G
579
A
Show more
Deletions
973, 5399-5458
Insertions
ins_0:TACAAACTTGCACACTCGAAAAAA, ins_5119:CCAAAA, ins_7581:A, ins_15222:T
Amino acid mutations
Mutations called relative to the
OP975389.1
reference
Substitutions
F
F:
L
45
F
F:
K
65
Q
F:
V
103
A
F:
Y
117
H
F:
Q
172
L
F:
L
173
S
F:
R
191
K
F:
M
206
I
F:
R
209
Q
F:
S
380
N
G
G:
N
4
D
G:
A
74
V
G:
T
89
S
G:
S
100
G
G:
A
107
T
G:
S
124
P
G:
T
131
A
G:
T
136
R
G:
I
137
A
G:
S
138
T
G:
K
145
R
G:
T
198
I
G:
P
205
L
G:
L
217
P
G:
T
220
P
G:
P
221
L
G:
I
227
T
G:
T
279
I
Show more
L
L:
I
56
L
L:
Y
74
F
L:
V
151
A
L:
Y
177
H
L:
C
195
Y
L:
Y
254
H
L:
I
445
V
L:
V
715
I
L:
N
943
S
L:
K
960
R
L:
G
1250
S
L:
A
1479
V
L:
A
1712
T
L:
V
1716
M
L:
G
1735
R
L:
S
1736
N
L:
E
1787
A
L:
K
1844
R
L:
T
1987
I
L:
A
2119
V
M2-1
M2-1:
S
142
N
M2-1:
S
174
N
M2-1:
I
181
V
M2-2
M2-2:
I
2
T
M2-2:
T
30
I
M2-2:
I
82
V
N
N:
K
91
R
N:
V
97
I
N:
Y
216
H
N:
T
372
A
NS1
NS1:
V
65
A
NS1:
I
105
M
NS1:
H
138
N
NS1:
S
139
P
NS2
NS2:
N
123
K
P
P:
N
61
T
P:
I
62
V
P:
P
73
S
P:
A
77
T
SH
SH:
G
2
V
SH:
I
49
A
SH:
D
64
N
Deletions
G:252-271
Insertions
ins_G:158:PK
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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