PP_0023XSA.1

Display Name: Thailand/PP_0023XSA.1/2009-11-11
O. Nilwong, P. Bhattarakosol & E. Kowitdamrong

Sample details

Collection date
2009-11-11
Country
Thailand
Isolate name
BKK/CU54/09

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:45insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B

Authors

Author affiliations
Chulalongkorn University, Medical Microbiology (Interdisciplinary Program), Graduate School

INSDC

INSDC accession
NCBI release date
2017-01-31
NCBI update date
2017-01-31

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1473
Completeness
9.68%
# of SNPs
52
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
KR816687.1
Submitting group
Date submitted
2025-05-22 14:43:46 UTC
Date released
2025-05-22 14:48:54 UTC
Earliest release date
2017-01-31

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A5780G
  • C5807T
  • G5810T
  • A5868C
  • C5894T
  • T5903A
  • T5933C
  • T5948A
  • T5958C
  • T5983C
  • C5984T
  • C6017T
  • T6024C
  • C6026T
  • A6056G
  • T6128C
  • C6170T
  • C6189T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:L45F
  • F:K65Q
  • F:V103A
  • F:Y117H
  • F:Q172L
  • F:L173S
  • F:R191K
  • F:N201D
  • F:M206I
  • F:R209Q
  • F:S211N
    • Deletions
    None
    Insertions
    None

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