PP_0023F8V.1

Display Name: PP_0023F8V.1
M. N. Widjojoatmodjo, L. Bogaert, B. Meek, R. Zahn, C. A. Warnar, D. N. Czapka, R. Bolder, M. van der Meer, A. Gecgel, E. van der Helm, J. Vellinga, J. Custers, J. Serroyen, K. Radosevic, H. Schuitemaker, F. Coenjaerts & M. Viveen

Sample details

Isolate name
05-036549

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:45insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B

Authors

Author affiliations
Janssen Infectious Diseases and Vaccines, Viral Vaccines

INSDC

INSDC accession
NCBI release date
2015-04-27
NCBI update date
2015-04-27

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1725
Completeness
11.33%
# of SNPs
46
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
1
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
KP860083.1
Submitting group
Date submitted
2025-05-22 14:43:46 UTC
Date released
2025-05-22 14:48:23 UTC
Earliest release date
2015-04-27

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • T5741C
  • A5780G
  • C5807T
  • G5810T
  • A5868C
  • C5894T
  • T5903A
  • T5933C
  • T5948A
  • T5958C
  • T5983C
  • C6017T
  • T6024C
  • T6128C
  • C6189T
  • A6190T
  • C6192T
  • T6193C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:L45F
  • F:K65Q
  • F:V103A
  • F:Y117H
  • F:Q172L
  • F:L173S
  • F:R191K
  • F:M206I
  • F:R209Q
  • F:S211N
  • F:N554K
    • Deletions
    None
    Insertions
    None

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