Pathoplexus
Organisms
RSV-A
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Funding
Contact
Status
RSV-A
|
Browse data
Submit sequences
Tools
Select organism section
Browse data
Submit sequences
Tools
PP_001VLQ7.1
Download
Download FASTA
Download metadata TSV
Display Name: Netherlands/PP_001VLQ7.1/2020-02-10
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Sample details
Collection date
2020-02-10
Country
Netherlands
Isolate name
310103063
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-05-22 14:42
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.5
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
INSDC
INSDC accession
PP376570.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Host
Host taxon ID
9606
Host name - scientific
Homo sapiens
Alignment and QC metrics
Length
15227
Completeness
100.00%
# of SNPs
218
# of inserted bases
3
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0
Submission details
Submission ID
PP376570.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-05-22 14:41:42 UTC
Date released
2025-05-22 15:06:40 UTC
Earliest release date
2024-04-09
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
183
T
A
285
C
C
528
T
C
589
T
A
838
G
A
940
C
A
979
T
A
1009
G
C
1010
T
C
1012
T
T
1028
C
G
1050
A
A
1051
C
T
1359
C
T
1380
C
Show more
Deletions
4592
Insertions
ins_7586:AAA
Amino acid mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
F
F:
F
22
L
F:
K
68
E
F:
Y
117
H
F:
T
122
A
F:
V
127
A
F:
S
169
N
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
S
102
F
G:
V
131
I
G:
I
134
K
G:
I
141
V
G:
P
206
Q
G:
K
209
M
G:
K
216
N
G:
G
224
E
G:
V
225
A
G:
S
243
I
G:
L
248
I
G:
K
262
E
G:
I
265
L
G:
P
274
L
G:
D
284
G
Show more
L
L:
P
171
L
L:
R
256
K
L:
K
370
N
L:
R
555
K
L:
Y
598
H
L:
N
603
D
L:
L
1438
Q
L:
N
1723
G
L:
E
1725
G
L:
G
1731
D
L:
I
1741
R
L:
V
1943
D
M2-1
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
N
N:
V
352
A
P
P:
E
2
D
P:
L
55
P
P:
I
106
M
P:
V
171
I
Deletions
None
Insertions
None
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue