PP_001QT5F.1

Display Name: Canada/PP_001QT5F.1/2020-08-01
D. Wilkins, A. C. Langedijk, R. J. Lebbink, C. A. Morehouse, M. E. Abram, B. Ahani, A. A. Aksyuk, E. Baraldi, T. Brady, A. T. Chen, H. Chi, E. H. Choi, R. Cohen, D. M. Danilenko, V. Gopalakrishnan, A. Greenough, T. Heikkinen, M. Hosoya, C. Keller, E. J. Kelly, L. Kragten-Tabatabaie, F. Martinon-Torres, A. H. Mascarenas-de Los Santos, M. C. Nunes, ..., L. J. Bont

Sample details

Collection date
2020-08-01
Country
Canada
Isolate name
10203025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:42insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.2.2

Authors

Author affiliations
Astrazeneca, Early Vaccines & Immune Therapies

INSDC

INSDC accession
NCBI release date
2023-03-05
NCBI update date
2023-03-05

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1725
Completeness
11.33%
# of SNPs
16
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
OQ275852.1
Submitting group
Date submitted
2025-05-22 14:41:42 UTC
Date released
2025-05-22 15:02:56 UTC
Earliest release date
2023-03-05

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • G6015A
  • C6059T
  • T6146C
  • T6329C
  • C6387T
  • C6520T
  • T6530A
  • T6668C
  • G6782T
  • T6980C
  • T7028C
  • T7058C
  • T7076C
  • A7205G
  • A7313G
  • C7386T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:A107T
  • F:S275F
    • Deletions
    None
    Insertions
    None

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