PP_001911C.1

Display Name: Canada/PP_001911C.1/2007-01-11
J. Papenburg, J. Carbonneau, M. E. Hamelin, S. Isabel, X. Bouhy, N. Ohoumanne, P. Dery, B. A. Paes, J. Corbeil, M. G. Bergeron, G. De Serres, G. Boivin & M.-E. Hamelin

Sample details

Collection date
2007-01-11
Country
Canada
Isolate name
C0607-1023-A-PZB-K272Q

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-05-22 14:40insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.2.1.1

Authors

Author affiliations
Universite Laval, Centre de Recherche en Infectiologie

INSDC

INSDC accession
NCBI release date
2011-12-27
NCBI update date
2011-12-27

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1524
Completeness
10.01%
# of SNPs
61
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
JF776696.1
Submitting group
Date submitted
2025-05-22 14:39:46 UTC
Date released
2025-05-22 14:49:44 UTC
Earliest release date
2011-12-27

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C5838T
  • T5909A
  • A5930G
  • G6010A
  • A6035G
  • T6044C
  • C6059T
  • C6068T
  • C6070A
  • T6086C
  • A6113C
  • C6155T
  • G6164A
  • G6182A
  • T6242A
  • C6251T
  • G6269A
  • T6311C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:S105N
  • F:T125N
  • F:K272Q
  • F:S276N
  • F:A518V
    • Deletions
    None
    Insertions
    None

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