PP_00149M7.1

Display Name: Armenia/PP_00149M7.1/2023
A. Zhirova, Y. Lisitskaya & A. Volynkina

Sample details

Collection date
2023
Country
Armenia
Isolate name
423-ARM-TI-2023

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-03-03 03:31insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Stavropol State Research Anti-Plague Institute, Laboratory for diagnostics of viral infections

INSDC

INSDC accession S
NCBI release date
2025-03-02

Host

Host taxon ID
Host name - scientific
Ixodoidea

Alignment and QC metrics S

Length S
538
Completeness S
32.18%
# of SNPs S
82
# of inserted bases S
0
# of deleted bases S
0
# of ambiguous bases S
0
# of unknown bases S
0
# of frame shifts S
0
# of stop codons S
0

Submission details

Submission ID
PQ878907.1.S
Submitting group
Date submitted
2025-03-03 03:31:20 UTC
Date released
2025-03-03 03:31:25 UTC
Earliest release date
2025-03-02

Lineage

Segment S Lineage
V

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:C115T
  • S:G134A
  • S:C142T
  • S:T157C
  • S:C166T
  • S:G171A
  • S:T175A
  • S:C178A
  • S:T181C
  • S:T182C
  • S:C187T
  • S:G189A
  • S:T211C
  • S:C217T
  • S:C244T
  • S:T250G
  • S:C254T
  • S:G262A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
    • Deletions
    None
    Insertions
    None

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