PP_000SMNH.1

Display Name: Nigeria/PP_000SMNH.1/1966
L. Peng, S. Hirsch, G. Kocher, M. Mehta & M. Holbrook

Sample details

Collection date
1966
Country
Nigeria
Isolate name
CCHFV_IRF414_S

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-11-12 19:51insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
NIH/NIAID, IRF

INSDC

INSDC accession S
NCBI release date
2024-11-09

Host

Host taxon ID
Host name - scientific
Hyalomma excavatum
Is lab host
True

Alignment and QC metrics S

Length S
1588
Completeness S
94.98%
# of SNPs S
0
# of inserted bases S
0
# of deleted bases S
0
# of ambiguous bases S
0
# of unknown bases S
0
# of frame shifts S
0
# of stop codons S
0

Submission details

Submission ID
PQ463984.1.S
Submitting group
Date submitted
2024-11-12 19:51:06 UTC
Date released
2024-11-12 19:51:34 UTC
Earliest release date
2024-11-09

Lineage

Segment S Lineage
III

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions
Deletions
None
Insertions
None

Report an issue with this sequence or metadata

Create GitHub issue