accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	dataUseTerms	dataUseTermsRestrictedUntil	dataBecameOpenAt	dataUseTermsUrl	versionStatus	versionComment	pipelineVersion	ampliconPcrPrimerScheme	ampliconSize	anatomicalMaterial	anatomicalPart	assemblyReferenceGenomeAccession	authorAffiliations	authors	bioprojectAccession	biosampleAccession	bodyProduct	breadthOfCoverage	cellLine	collectionDevice	collectionMethod	comment	completeness	consensusSequenceSoftwareName	consensusSequenceSoftwareVersion	cultureId	dehostingMethod	depthOfCoverage	diagnosticMeasurementMethod	diagnosticMeasurementUnit	diagnosticMeasurementValue	diagnosticTargetGeneName	diagnosticTargetPresence	displayName	earliestReleaseDate	environmentalMaterial	environmentalSite	experimentalSpecimenRoleType	exposureDetails	exposureEvent	exposureSetting	foodProduct	foodProductProperties	frameShifts	gcaAccession	geoLocAdmin1	geoLocAdmin2	geoLocCity	geoLocCountry	geoLocLatitude	geoLocLongitude	geoLocSite	gisaidIsolateId	hostAge	hostAgeBin	hostDisease	hostGender	hostHealthOutcome	hostHealthState	hostNameCommon	hostNameScientific	hostOriginCountry	hostRole	hostTaxonId	hostVaccinationStatus	insdcAccessionBase	insdcAccessionFull	insdcRawReadsAccession	insdcVersion	isLabHost	length	lineage	ncbiReleaseDate	ncbiSourceDb	ncbiSubmitterCountry	ncbiUpdateDate	ncbiVirusName	ncbiVirusTaxId	pairedEndInsertSize	passageMethod	passageNumber	presamplingActivity	previousInfectionDisease	previousInfectionOrganism	purposeOfSampling	purposeOfSequencing	qualityControlDetails	qualityControlDetermination	qualityControlIssues	qualityControlMethodName	qualityControlMethodVersion	rawSequenceDataProcessingMethod	sampleCollectionDate	sampleCollectionDateRangeLower	sampleCollectionDateRangeUpper	sampleReceivedDate	sampleType	sequencedByContactEmail	sequencedByContactName	sequencedByOrganization	sequencingAssayType	sequencingDate	sequencingInstrument	sequencingLibrarySelection	sequencingLibrarySource	sequencingProtocol	serotype	signsAndSymptoms	specimenCollectorSampleId	specimenProcessing	specimenProcessingDetails	stopCodons	totalAmbiguousNucs	totalDeletedNucs	totalFrameShifts	totalInsertedNucs	totalSnps	totalStopCodons	totalUnknownNucs	travelHistory	rawReads	annotations
PP_007ZXV6.1	PP_007ZXV6	1	3500-26-0001	false	panchi	National Reference Centre for Emerging Viral Infections (CRIVE)	3136	1791209786	2026-10-05	1791209837	2026-10-05	OPEN		2026-10-05	https://pathoplexus.org/about/terms-of-use/open-data	LATEST_VERSION		34						Geneva University Hospitals, Geneva, Switzerland	Cordey, Samuel; Laubscher, Florian; Pérez-Rodríguez, Francisco-Javier; Schibler, Manuel; Thomasson, Valentine; Chudzinski, Valentin	PRJEB128194	SAMEA123901591							0.9947775809008673											DENV-2/Switzerland/3500-26-0001/2026-08-28	2026-10-05														Switzerland											human	Homo sapiens			9606							10667	2II_F.1.1.5																					2026-08-28	2026-08-28	2026-08-28								Illumina MiSeq			Viral genomes were generated by metagenomic sequencing of total RNA. Libraries were prepared using the TruSeq Stranded Total RNA Library Prep Gold kit (Illumina) and sequenced on an Illumina MiSeq instrument using MiSeq Reagent Kit v3 (150 cycles).	DENV-2						0	0	0	0	839	0	0			"[{""fileId"":""FILE_008S3WB"",""name"":""PP_007ZXV6.1.embl"",""url"":""https://pathoplexus.org/seq/PP_007ZXV6.1/annotations/PP_007ZXV6.1.embl""}]"
