PP_006ZSY6.1

Restricted-Use sequence

This sequence is only available under the Restricted Use Terms. This prohibits publications that use this sequence as focal data during the restricted-use period, except with the consent of the sequence submitters.

Spain/PP_006ZSY6.1/2026-02-10

Cristina Andres, Alejandra Gonzalez Sanchez, Ignasi Prats, Karen Garcia Comunas, Raquel Vaz, Maria Carmen Martin, Nieves Larrosa & Andres Anton

Hospital Universitari Vall d'Hebron - Vall d'Hebron Institut de Recerca

Sample details

Collection date

2026-02-10

Sampling location

Spain (Catalonia)

Data use terms

Changed	User	Data use terms
2026-05-22 06:28	cristina.andresverges@vallhebron.cat	RESTRICTED until 2026-12-31

RESTRICTED

Data use terms URL

https://pathoplexus.org/about/terms-of-use/restricted-data

Lineage

Host

human (Homo sapiens)

Submission details

Submission ID

hMPV/B/Spain/CT-HUVH-638269/2026

Submitting group

Respiratory Virus Unit, Hospital Universitari Vall d'Hebron, Barcelona, Spain

Date submitted

2026-05-22 06:28:23 UTC

Date released

2026-05-22 06:32:11 UTC

Earliest release date

2026-05-22

Alignment and QC

Length

10234 (77.2%)

# of SNPs

1983

# of inserted bases

# of deleted bases

# of unknown bases

# of frame shifts

# of stop codons

Frame shifts

G:148-161(nt:6688-6727),G:207-224(nt:6864-6918)

Stop Codons

SH:178

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

A3046G
A3048G
G3067A
C3072T
T3075C
T3076A
T3078C
A3081G
G3084A
T3085C
A3087C
A3099G
C3102T
T3105G
T3108A
G3114A
C3117T
C3120T

Deletions

4684-4722, 6025-6027, 6109, 6110, 6196, 6210-6215, 6728, 6729, 6863, 6919, 6920, 6977-6984, 7009-7015, 7123, 7137-7139, 13188, 13204, 13205, 13283-13289, 13300-13313

Insertions

ins_4608:AAG, ins_5813:AGA, ins_6687:ACTACAGAGAAAAAGCT, ins_13229:G, ins_13350:G

Amino acid substitutions

Substitutions called relative to the NC_039199.1 reference

Substitutions

F

F:V6M
F:F9I
F:L36Q
F:A61T
F:R82K
F:V122I
F:T135N
F:N139G
F:K143T
F:D167E
F:R175S
F:K179R
F:T223N
F:N233Y
F:F258I
F:D280N
F:V286I
F:G294E

G

G:K4R
G:T10A
G:L14F
G:R17K
G:V18M
G:V22I
G:A23R
G:R24S
G:F28Y
G:K29R
G:S32T
G:V34I
G:I38L
G:T40V
G:I43M
G:I47V
G:Y48F
G:N52D

L

L:L4F
L:N5C
L:K36R
L:N42K
L:K61R
L:N65M
L:S66T
L:Y73H
L:I75V
L:V79I
L:V89T
L:T109S
L:N113S
L:S123T
L:D127N
L:S132N
L:S141V
L:K162R

M2-1

M2-1:I37L
M2-1:R52K
M2-1:S88G
M2-1:V108I
M2-1:S121N
M2-1:V130I
M2-1:R149K
M2-1:K160R
M2-1:A169T
M2-1:E170D

M2-2

M2-2:E18K
M2-2:V22K
M2-2:V28A
M2-2:D37E
M2-2:A41T
M2-2:N55S

SH

SH:I2K
SH:T17N
SH:H18Q
SH:L19I
SH:D25N
SH:V30L
SH:V33A
SH:L44F
SH:I50V
SH:I61A
SH:S64L
SH:T66N
SH:S73T
SH:S74K
SH:S75L
SH:V80T
SH:T82I
SH:K83R

Deletions

G

G:225, G:235

SH

SH:175