accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	dataUseTerms	dataUseTermsRestrictedUntil	dataBecameOpenAt	dataUseTermsUrl	versionStatus	versionComment	pipelineVersion	ampliconPcrPrimerScheme	ampliconSize	anatomicalMaterial	anatomicalPart	assemblyReferenceGenomeAccession	authorAffiliations	authors	bioprojectAccession	biosampleAccession	bodyProduct	breadthOfCoverage	cellLine	clade	collectionDevice	collectionMethod	comment	completeness	consensusSequenceSoftwareName	consensusSequenceSoftwareVersion	cultureId	dehostingMethod	depthOfCoverage	diagnosticMeasurementMethod	diagnosticMeasurementUnit	diagnosticMeasurementValue	diagnosticTargetGeneName	diagnosticTargetPresence	displayName	earliestReleaseDate	environmentalMaterial	environmentalSite	experimentalSpecimenRoleType	exposureDetails	exposureEvent	exposureSetting	foodProduct	foodProductProperties	frameShifts	gcaAccession	geoLocAdmin1	geoLocAdmin2	geoLocCity	geoLocCountry	geoLocLatitude	geoLocLongitude	geoLocSite	gisaidIsolateId	hostAge	hostAgeBin	hostDisease	hostGender	hostHealthOutcome	hostHealthState	hostNameCommon	hostNameScientific	hostOriginCountry	hostRole	hostTaxonId	hostVaccinationStatus	insdcAccessionBase	insdcAccessionFull	insdcRawReadsAccession	insdcVersion	isLabHost	length	lineage	ncbiReleaseDate	ncbiSourceDb	ncbiSubmitterCountry	ncbiUpdateDate	ncbiVirusName	ncbiVirusTaxId	outbreak	passageMethod	passageNumber	presamplingActivity	previousInfectionDisease	previousInfectionOrganism	purposeOfSampling	purposeOfSequencing	qualityControlDetails	qualityControlDetermination	qualityControlIssues	qualityControlMethodName	qualityControlMethodVersion	rawSequenceDataProcessingMethod	sampleCollectionDate	sampleCollectionDateRangeLower	sampleCollectionDateRangeUpper	sampleReceivedDate	sampleType	sequencedByContactEmail	sequencedByContactName	sequencedByOrganization	sequencingAssayType	sequencingDate	sequencingInstrument	sequencingProtocol	signsAndSymptoms	specimenCollectorSampleId	specimenProcessing	specimenProcessingDetails	stopCodons	totalAmbiguousNucs	totalDeletedNucs	totalFrameShifts	totalInsertedNucs	totalSnps	totalStopCodons	totalUnknownNucs	travelHistory
PP_006QKJR.1	PP_006QKJR	1	Mpxv/human/CAN/UN-NML-7407/2026	false	jaudet	SP_NML_PHAC	397	1774379907	2026-03-24	1774379938	2026-03-24	OPEN		2026-03-24	https://pathoplexus.org/about/terms-of-use/open-data	REVISED		17						National Microbiology Laboratory, Canada	Chan, Mable; Audet, Jonathan						Ib		Swab		0.9710459461789269											Canada/PP_006QKJR.1/2025-03	2026-03-24									OPG003:4-589(nt:2841-4598),OPG047:477-483(nt:29746-29766),OPG050:71-76(nt:33181-33198),OPG153:370-371(nt:136556-136560),OPG164:229(nt:143460-143464),OPG180:556-560(nt:154356-154371),OPG191:167-169(nt:166658-166667),OPG003_dup:4-589(nt:192612-194369)					Canada												Homo sapiens										193626	None							sh2023														2025-03	2025-03-01	2025-03-31	2025-03-01						2025-03-01	MinION	Genomes were generated through amplicon sequencing of 5 kb amplicons with Isabel schema primers. Libraries were created using the Oxford Nanopore SQK-NBD114.24 Native Barcoding Kit and sequenced on a MinION Mk1B and R10.4.1 flowcell. Missing amplicons were amplified individually and sequenced with the same protocol. Reads were aligned to NC_003310.1 using nf-ViralMutations.					OPG175:98	0	3144	8	243	811	1	5028