PP_006HYQE.1

DENV-2/India/FEB-1626/2025-02-21
H. Sivakumar, F. S. Philomenadin, N. Devanathan & R. Dhodapkar

JIPMER, Dept of Microbiology

Sample details

Collection date
2025-02-21
Sampling location
India (Puducherry)
Isolate name
FEB-1626

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-12 09:55insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2025-10-21
NCBI update date
2025-10-21

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
PX460871.1
Submitting group
Date submitted
2026-03-12 09:53:22 UTC
Date released
2026-03-12 10:35:01 UTC
Earliest release date
2025-10-21

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

Alignment and QC

Length
504 (4.7%)
# of SNPs
37

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A152T
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • C405T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

C

  • C:E19V
  • C:S101T
  • C:M104I
  • C:L108M

prM

  • prM:G7N
  • prM:K16R
  • prM:R19K
  • prM:S28E
  • prM:A29N
  • prM:I37M
  • prM:L41R
  • prM:E43A
  • prM:L44M
  • prM:M49I
  • prM:K52N
  • prM:R55L
  • prM:I56L
  • prM:T57R
  • prM:E58Q
  • prM:T59N
  • prM:D62E
  • prM:V64I
Deletions
N/A
Insertions
N/A

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